Visionary Intelligence for
Biomedical Image Analysis

Transforming complex biomedical imaging data into clear, actionable insights

Accelerating Innovation with Actionable Insights

At Mantalys, we uncover hidden patterns within biomedical imaging data through advanced analysis approaches that generate precise, actionable, quantitative insights.

  • Intuitive software for deeper imaging insights
  • Custom algorithm design tailored to your research needs
  • Hybrid AI designed for precision, speed, and scalability
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By Mantalys

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MantaPlexTM

Clear, intuitive workflows for multiplex tissue analysis

What Our Community Says

Jason Fernandes, PhD.Biomedical scientist

The impressive segmentation accuracy, user-friendly interface and resource utilization of MantaPlex™ offers a remarkably streamlined image analysis solution without requiring significant investment in expertise or hardware. Given the complexity and increasing adoption of high dimensional spatial microscopy, MantaPlex™ is truly a game-changer in this space and addresses a critical need for this rapidly advancing technology.

Jason Fernandes, PhD.PhD post-doctoral fellow at Centre de Recherches en Cancerologie de Toulouse (CRCT)
Louise Battut, PhD.Biomedical scientist

The software is very easy to use. The interface is intuitive, the commands are practical, and the analysis pipeline is very clear. The automatic cell counting is so fast, which is really impressive. It makes the analysis quick and efficient.

Louise Battut, PhD.PhD, post-doctoral fellow at Toulouse Institute for Infectious and Inflammatory Diseases (Infinity)

About
Mantalys

At Mantalys, we transform complex biomedical imaging data into clear, actionable insights using lightweight, sustainable AI solutions. From academic labs to biotech research hubs, our software and services solutions are designed to meet the challenges of the most demanding research environments.

Discover Mantalys

Resources
Center

MantaPlex™ Brochuredocument

MantaPlex™ Brochure

An in-depth look at our analysis pipeline

2026-06-21
Mantalys Brochuredocument

Mantalys Brochure

An overview of our company's vision

2026-06-21
[01] Welcome to MantaPlex™courses

[01] Welcome to MantaPlex™

Welcome to MantaPlex™ ! Get introduced to the platform and learn the basics to get started.

2026-01-01
[02] Splitting Whole Slide Imagescourses

[02] Splitting Whole Slide Images

Learn how to split and manage large whole slide images for efficient processing and analysis.

2026-01-02
[03] Tissue Maskcourses

[03] Tissue Mask

Discover how to use tissue masking features to define regions of interest for your analysis.

2026-01-03
[04] Channel Toolscourses

[04] Channel Tools

Master channel management tools for multi-channel imaging and fluorescence microscopy analysis.

2026-01-04
[05] Grid Viewcourses

[05] Grid View

Use grid view to visualize and compare multiple samples or regions simultaneously.

2026-01-05
[06] Draw and Manage Structurescourses

[06] Draw and Manage Structures

Learn to manually draw and manage anatomical structures and regions of interest.

2026-01-06
[07] Cell Phenotype Tablecourses

[07] Cell Phenotype Table

Explore cell phenotype tables to analyze and quantify different cell populations in your samples.

2026-01-07
[08] Test Regioncourses

[08] Test Region

Test experimental region-based analysis features in development for MantaPlex.

2026-01-08
[09] Single-Cell Analysiscourses

[09] Single-Cell Analysis

Perform detailed single-cell analysis including detection, morphology measurement, and marker quantification.

2026-01-09
[10] Fine Tuning Thresholds for Nuclear Segmentationcourses

[10] Fine Tuning Thresholds for Nuclear Segmentation

Learn to fine-tune thresholds for optimal nuclear segmentation performance.

2026-01-10
[11] Fine Tuning Thresholds for Feature Computation and Classificationcourses

[11] Fine Tuning Thresholds for Feature Computation and Classification

Learn to fine-tune thresholds for optimal feature computation and classification performance.

2026-01-11
[12] Cell Classification Toolscourses

[12] Cell Classification Tools

Classify cells into different phenotypes using machine learning-based classification tools.

2026-01-12
[13] Results Dashboardcourses

[13] Results Dashboard

Navigate the results dashboard to view, visualize, and export your analysis results.

2026-01-13
[14] Dimensionality Reductioncourses

[14] Dimensionality Reduction

Visualize high-dimensional cell data using dimensionality reduction techniques like UMAP and t-SNE.

2026-01-14
[15] Spatial Analysis Proximity Graph and Structure Generationcourses

[15] Spatial Analysis Proximity Graph and Structure Generation

Analyze spatial relationships between cells using proximity graphs and automated structure generation.

2026-01-15
[16] Spatial Analysis Proximity Profile and Nearest Neighbourcourses

[16] Spatial Analysis Proximity Profile and Nearest Neighbour

Explore proximity profiles and nearest neighbor analysis to understand spatial cell distributions.

2026-01-16
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